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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948477.1_cds_XP_016489742.1_80234
CDS Infomation

[gene=LOC107809596] [db_xref=GeneID:107809596] [protein=protein NSP-INTERACTING KINASE 2-like isoform X2] [protein_id=XP_016489742.1] [location=complement(join(74540..74869,75187..75566,76528..76869,76962..77111,77230..77324,77665..77724,77819..77890,78030..78119,78209..78280,78368..78497,78624..78711))] [gbkey=CDS]
Sequence

ATGATTGCTATTTTGGGATATTTGACCTTATTCAGCTTCTTGGCTTATGCTAATGCTATG
CTTACCCCAGCTGGTGTCAATTATGAAGTGCAAGCTCTAATGGAAATAAAGAAGGCTTTA
ACTGATCCTCATAATGTTTTGAACTGGGATGAAAATGCTGTTGATCCCTGTAGCTGGAAT
ATGGTGACTTGTTCAACTGATAAATTTGTCATTAGCCTGGCAAGTCCTAGCCAAAGTTTG
TCTGGCAAAATATCACCATATATTCACAATTTGACTCACCTTGAGCTTGTACTTCTGCAG
AGCAATAATATTTCAGGACCAATTCCTTTGGAGCTTGGAATGCTTCCAAAACTTAAGACA
ATTGATCTTTCTGATAACAAGAGATTAAACAACAACAGTCTAACTGGAGCAGTTCCTGTG
GACTTGGCCAATATGACTCAGCTGTCACTTATGGACTTGTCTTTCAACAATCTCAGTGGT
CCTGTACCAAGGCTTCTTGCTAAAACATTCAACATTTTAGGGAATCCTATGATATGTGCA
ACTGGTAAAGAGGCAGAATGCAATGGAACAGCACCCATACCCCTCTCCTTTTTATACAAT
CCACAAGATAATCAGCCTTCTGGAAAACCAAAGACTCACAAGTTCGCCTTCGCCTTTGGG
ACAAGTTTAGGGTGCATCTGCCTACTAATAATCGGCTTTGGCTTCTTTCTGTGGTGGAGA
CAAAAACACAATAAGCAGATTTTCTTTGACAGTAATGAGCTACATCATGAAGAAGTGTGC
TTAGGCAACTTAAGGAGATTCCAATTTAAGGAACTTCAGGCTGCTACAAACAACTTCAGC
AGCAAGAACATACTAGGGAAAGGTGGTTTTGGACATGTTTATAAAGGCCGTCTTCAAGAT
GGGAATATTGTAGCTGTAAAAAGGCTCAAAGATGGAAATGCAGCTGGAGGCGATCAGCAA
TTTCAGACTGAAGTCGCGTTGATCAGCCTAGCAGTGCATCGCAATCTTCTCCGGTTGTAT
GGATTTTGCATGACACCAACTGAAAGGCTGCTGGTCTATCCTTACATGTCTAATGGAAGT
GTAGCTTCACGGCTCAAAGCCAAACCAACCTTGGATTGGAGTACAAGAAAAAGCATAGCT
TTGGGAGCTGCAAGGGGTTTATTATATCTGCATGAGCAGTGTGATCCTAAGATCATTCAC
AGGGATGTGAAAGCTGCAAACATATTACTTGATGACTACTGTGAGGCTGTTGTGGGAGAT
TTCAGATTGGCAAAGCTTCTGGATCATCATGATTCACACGTCACAACCGCGGTTAGGGGA
ACTGTTGGGCATATAGCTCCCGAGTACCTTTCTACCGGACAGTCCTCTGATAAAACGGAC
GTTTTTGGTTTTGGTATTCTCTTGCTAGAATTGATCACTGGCCAAAGAGCTTTGGAATTT
GGTAAAGCAGCAAACCAGAAAGGCGCCATGCTTGATTGGGTAAAAAAGATACACCAGGAG
AAAAAGCTAGACATGTTAGTGGACAAGGACATGAAAAACAACTATGATAGGATAGAGCTA
GAGGAAATGGTACAAGTAGCATTATTGTGCACTCAATATCACCCAAGTCAGAGACCAAAA
ATGTCAGAAGTTGTAAGAATGCTAGAAGGGGATGGGCTAGCAGAGAAATGGGAAGCTTCT
CAAAGAGCAGAACCTAACACAAGATGCAGTAGAGCCAATGAATTTTCCTCTTCAGAAAGA
TACTCTGATCTCACTGATAATGATTCTTCATTGCTTGTACAAGCAATGGAACTATCTGGT
CCAAGATGA

Peptide Sequence

PEP ID

XP_016489742.1
PEP Infomation

PREDICTED: protein NSP-INTERACTING KINASE 2-like isoform X2 [Nicotiana tabacum]
Sequence

MIAILGYLTLFSFLAYANAMLTPAGVNYEVQALMEIKKALTDPHNVLNWDENAVDPCSWN
MVTCSTDKFVISLASPSQSLSGKISPYIHNLTHLELVLLQSNNISGPIPLELGMLPKLKT
IDLSDNKRLNNNSLTGAVPVDLANMTQLSLMDLSFNNLSGPVPRLLAKTFNILGNPMICA
TGKEAECNGTAPIPLSFLYNPQDNQPSGKPKTHKFAFAFGTSLGCICLLIIGFGFFLWWR
QKHNKQIFFDSNELHHEEVCLGNLRRFQFKELQAATNNFSSKNILGKGGFGHVYKGRLQD
GNIVAVKRLKDGNAAGGDQQFQTEVALISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGS
VASRLKAKPTLDWSTRKSIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGD
FRLAKLLDHHDSHVTTAVRGTVGHIAPEYLSTGQSSDKTDVFGFGILLLELITGQRALEF
GKAANQKGAMLDWVKKIHQEKKLDMLVDKDMKNNYDRIELEEMVQVALLCTQYHPSQRPK
MSEVVRMLEGDGLAEKWEASQRAEPNTRCSRANEFSSSERYSDLTDNDSSLLVQAMELSG
PR

Transcript Sequence

Gene sequence data has not been registered.